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資源導航

  • 資源導航
  • Small RNA
1. SeqSolve
Simple analysis of Next Generation Sequencing data.
標簽：RNA-Seq,?ChIP-Seq,Transcriptomics,?Small RNA transcriptome
2. CASHX
Parse, map, quantify and manage large quantities of short-read sequence data.
標簽：Small RNA transcriptome
3. SeqBuster
SeqBuster, a web-based bioinformatic tool offering a custom analysis of deep sequencing data at different levels, with special emphasis on the analysis of miRNA variants or isomiRs and the discovering of new small RNAs.
標簽：Small RNA transcriptome,?MiRNA
4. MirTools
Web server for microRNA profiling and discovery based on high-throughput sequencing
標簽：Small RNA transcriptome,?MiRNA
5. E-miR
Perl tools for processing miRNA sequencing data
標簽：Small RNA transcriptome,?MiRNA
6. DSAP
Automated multiple-task web service designed to provide a total solution to analyzing deep-sequencing small RNA datasets generated by next-generation sequencing technology
標簽：Small RNA transcriptome,?MiRNA
7. Partek Genomics Suite
Easy to use software providing A to Z analysis for all Next Generation Sequencing and Microarray data.
標簽：Allele-specific transcription,RNA-Seq Quantitation,Epigenomics,?Functional Genomics,?ChIP-Seq,Alternative Splicing,?SNP discovery,?Small RNA transcriptome
8. Avadis NGS
Strand NGS formerly Avadis NGS is a desktop software platform for alignment, analysis, visualization, and management of data generated by next-generation sequencing (NGS) platforms. It supports workflows for RNA-Seq, DNA-Seq, small RNA-Seq, ChIP-Seq, and Methyl-Seq data analysis. Strand...
標簽：ChIP-Seq,?DNA-Seq,?RNA-Seq,Small RNA,?Methyl-Seq,?Pathway analysis
9. Skewer
Skewer implements a novel dynamic programming algorithm dedicated to the task of adapter trimming and it is specially designed for processing illumina paired-end sequences.
標簽：Small RNA Sequencing,?RNA-Seq,Whole Genome Resequencing,?De novo Sequencing
10. Syapse
Syapse is a platform and application suite for bringing together omics and clinical data.
標簽：Allele-specific transcription,DNA methylation,?DNA-Seq,InDel discovery,?SNP discovery,?Structural variation,?RNA-Seq,?Small RNA transcriptome,?ChIP-Seq,Comparative genomics,Comparative transcriptomics,Epigenomics,?Genomics,Personal genomics,?Population ge
11. VisSR
VisSR (Visualisation of sRNAs): generate a visual representation of sRNAs and user-imported genomic features.
標簽：Small RNA transcriptome